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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14668443_14668609_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14668443 - 14668609

Intron Length:

167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

ATGTCTTTTACT

Flanking Amino Acid:

LSVDQNQNTYRLLSSGSLVI

Intron Amino Acid Position:

3854

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

78.2

31.2

Major BPS

0.79

0.8

83.7

25.7

Major PPT

96.4

1.04

0.5

95.9

14.1

Minor 5ss

25.4

-2.8

3.5

36.8

47.7

Minor BPS

68.8

0.67

1.6

82.01

39.5

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011880

14638056 - 14826398

188343

ENSAPLT00000047505

14638056 - 14826313

188258