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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14669308_14670274_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14669308 - 14670274

Intron Length:

967

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTATGC

5'SS Class:

major

3'SS Sequence:

GGCTTTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

GTAGGAAAAATT

Flanking Amino Acid:

DGVVFTGNNTRYSILEDGSL

Intron Amino Acid Position:

3759

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

61.4

38.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

0.59

72.5

42.4

Minor 5ss

44.4

-0.6

2.8

44.5

Minor BPS

35.3

-1

2.2

51.42

42.9

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047505

14638056 - 14826313

188258

ENSAPLT00000033587

14638056 - 14826398

188343

ENSAPLT00000011880

14638056 - 14826398

188343