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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14670420_14671486_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14670420 - 14671486

Intron Length:

1067

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAAATTA

5'SS Class:

major

3'SS Sequence:

TTTTCCTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTCCTTTACA

Flanking Amino Acid:

MTREFVLTVHVAPTIQSSPQ

Intron Amino Acid Position:

3711

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

72.9

32.2

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

92.9

0.96

0.6

87.9

22.2

Minor 5ss

-1

3.2

52.8

46.3

Minor BPS

83.6

1.05

1.4

91.85

28.4

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033587

14638056 - 14826398

188343

ENSAPLT00000011880

14638056 - 14826398

188343

ENSAPLT00000047505

14638056 - 14826313

188258