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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14678157_14678585_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14678157 - 14678585

Intron Length:

429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGAAT

U12 Branch Point Sequence:

TCTGTGTGAATC

Flanking Amino Acid:

DNKHYSLQIFVPPSLDNAGG

Intron Amino Acid Position:

3434

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

27.9

Major BPS

59.4

0.24

1.5

69.7

44.2

Major PPT

86.6

0.82

0.7

81.5

30.6

Minor 5ss

44.9

-0.5

2.8

58.5

40.5

Minor BPS

45.5

-0.3

2.2

57.85

41.9

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047505

14638056 - 14826313

188258

ENSAPLT00000033587

14638056 - 14826398

188343

ENSAPLT00000011880

14638056 - 14826398

188343