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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14680690_14681310_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14680690 - 14681310

Intron Length:

621

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTA|GCAGGTACT

5'SS Class:

major

3'SS Sequence:

AGAGTAACTCCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TGTTTTATGACC

Flanking Amino Acid:

DLQRIRQVKINGSTLTIFRA

Intron Amino Acid Position:

3303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.2

75.7

33.2

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

57.8

0.18

1.1

45.5

45.2

Minor 5ss

28.5

-2.5

44.5

38.2

Minor BPS

0.23

1.6

70.78

34.3

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047505

14638056 - 14826313

188258