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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14683591_14683843_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14683591 - 14683843

Intron Length:

253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTCAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTATTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTCTTAAAT

Flanking Amino Acid:

GQTLRIKGAEVSDTGQYVCK

Intron Amino Acid Position:

3124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

68.8

43.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.3

0.73

0.8

75.2

Minor 5ss

32.2

-2

3.1

46.1

Minor BPS

84.8

1.17

1.1

97.05

26.9

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033587

14638056 - 14826398

188343

ENSAPLT00000011880

14638056 - 14826398

188343

ENSAPLT00000047505

14638056 - 14826313

188258