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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14688620_14689512_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14688620 - 14689512

Intron Length:

893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCTCTA

5'SS Class:

major

3'SS Sequence:

TTCTTTCTCTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

ATTGTCTCAACA

Flanking Amino Acid:

TFLSNGRRLQISNAQITDTG

Intron Amino Acid Position:

2932

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.2

68.9

43.8

Major BPS

71.4

0.53

67.3

39.3

Major PPT

84.6

0.78

0.6

84.8

22.9

Minor 5ss

41.9

-0.9

3.2

58.4

46.1

Minor BPS

63.1

0.41

1.6

73.6

38.2

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011880

14638056 - 14826398

188343

ENSAPLT00000047505

14638056 - 14826313

188258

ENSAPLT00000033587

14638056 - 14826398

188343