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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14689701_14690512_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14689701 - 14690512

Intron Length:

812

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGCTTT

5'SS Class:

weak_major

3'SS Sequence:

TGCTCTTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

GTATTCTTATAT

Flanking Amino Acid:

DSIHYDVRVLLPPSISGADG

Intron Amino Acid Position:

2869

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.1

68.2

39.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

80.2

0.68

0.8

37.4

Minor 5ss

47.3

-0.3

3.1

74.4

41.8

Minor BPS

58.7

0.35

1.7

74.79

41.5

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033587

14638056 - 14826398

188343

ENSAPLT00000011880

14638056 - 14826398

188343

ENSAPLT00000047505

14638056 - 14826313

188258