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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14698782_14699522_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14698782 - 14699522

Intron Length:

741

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGCTCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TGTTTGATGATT

Flanking Amino Acid:

KSKSYSLNVLVSPVIVGADS

Intron Amino Acid Position:

2568

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

64.3

41.6

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

73.5

0.53

0.9

66.1

40.8

Minor 5ss

31.4

-2.1

3.1

36.3

41.6

Minor BPS

46.9

-0.1

2.3

39.3

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047505

14638056 - 14826313

188258

ENSAPLT00000033587

14638056 - 14826398

188343

ENSAPLT00000011880

14638056 - 14826398

188343