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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14723383_14724771_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14723383 - 14724771

Intron Length:

1389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCACA

5'SS Class:

strong_major

3'SS Sequence:

TTCCATTATGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

CTTGTGATAACT

Flanking Amino Acid:

ECRATGNPLPAITWYKDNRP

Intron Amino Acid Position:

1950

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

73.3

37.4

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

0.63

0.9

73.2

35.9

Minor 5ss

45.8

-0.4

2.5

58.4

45.9

Minor BPS

-0.1

2.4

71.76

45.4

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033587

14638056 - 14826398

188343

ENSAPLT00000011880

14638056 - 14826398

188343

ENSAPLT00000047505

14638056 - 14826313

188258