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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14726354_14727576_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14726354 - 14727576

Intron Length:

1223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TGTTTTGGTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAA

U12 Branch Point Sequence:

TGTTGTGTAAAG

Flanking Amino Acid:

PVNTARGNTRLESSGRILQV

Intron Amino Acid Position:

1877

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

78.2

36.3

Major BPS

57.5

0.19

1.4

61.7

43.1

Major PPT

77.3

0.61

72.2

42.7

Minor 5ss

39.6

-1.2

2.8

49.5

40.3

Minor BPS

44.6

-0.5

2.4

56.87

44.7

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033587

14638056 - 14826398

188343