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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14734255_14738279_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14734255 - 14738279

Intron Length:

4025

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTGTTGATT

5'SS Class:

weak_major

3'SS Sequence:

CCCATCTCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TAAACCTCATCT

Flanking Amino Acid:

TIAINSFRIFSGPGLTEWQH

Intron Amino Acid Position:

1352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.2

0.03

1.1

58.8

39.2

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

74.3

0.55

0.8

64.9

36.3

Minor 5ss

41.5

-0.9

3.3

62.6

43.3

Minor BPS

52.5

0.16

1.9

71.84

44.1

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040014

14734169 - 14831203

97035