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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14735979_14736856_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14735979 - 14736856

Intron Length:

878

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

ATCTCTATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCTAT

U12 Branch Point Sequence:

GTTCTGTGAAGT

Flanking Amino Acid:

FPDIHWFKDGKPLFLGDPNV

Intron Amino Acid Position:

1493

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

89.9

22.1

Major BPS

61.2

0.28

1.4

60.7

45.4

Major PPT

79.2

0.66

0.9

70.4

39.4

Minor 5ss

-1

2.8

51.7

39.1

Minor BPS

44.4

-0.3

2.3

66.64

43.8

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047505

14638056 - 14826313

188258

ENSAPLT00000033587

14638056 - 14826398

188343

ENSAPLT00000011880

14638056 - 14826398

188343