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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14737670_14738337_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14737670 - 14738337

Intron Length:

668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTACT

5'SS Class:

strong_major

3'SS Sequence:

GGGTTCTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATAAT

U12 Branch Point Sequence:

GATCACATAATA

Flanking Amino Acid:

IISWYKEDTQVVESSALQIL

Intron Amino Acid Position:

1402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

84.4

33.5

Major BPS

66.4

0.41

1.1

66.3

36.5

Major PPT

65.6

0.35

1.1

42.6

Minor 5ss

-1.5

3.1

51.8

44.8

Minor BPS

49.2

-0

1.8

61.57

37.5

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047505

14638056 - 14826313

188258

ENSAPLT00000033587

14638056 - 14826398

188343

ENSAPLT00000011880

14638056 - 14826398

188343