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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14738469_14739506_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14738469 - 14739506

Intron Length:

1038

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAATAAT

5'SS Class:

strong_major

3'SS Sequence:

AACTTTCTCGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TGATTTTGAACT

Flanking Amino Acid:

TERKYNLKVHVPPEIRDQEK

Intron Amino Acid Position:

1358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

82.1

30.4

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

71.3

0.48

0.8

66.2

34.8

Minor 5ss

36.9

-1.5

2.9

47.6

42.5

Minor BPS

65.4

0.56

1.4

78.22

37.7

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047505

14638056 - 14826313

188258

ENSAPLT00000040014

14734169 - 14831203

97035

ENSAPLT00000033587

14638056 - 14826398

188343

ENSAPLT00000011880

14638056 - 14826398

188343