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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14739702_14740115_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14739702 - 14740115

Intron Length:

414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGTGTATC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TGTTTCTCATTA

Flanking Amino Acid:

QRIAFPCPARGTPKPVIKWL

Intron Amino Acid Position:

1293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.8

83.1

28.7

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

75.3

0.57

0.9

75.5

34.3

Minor 5ss

40.9

-1

2.7

53.5

43.9

Minor BPS

53.8

0.12

1.8

67.91

38.8

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033587

14638056 - 14826398

188343

ENSAPLT00000011880

14638056 - 14826398

188343

ENSAPLT00000047505

14638056 - 14826313

188258

ENSAPLT00000040014

14734169 - 14831203

97035