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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14758405_14759501_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14758405 - 14759501

Intron Length:

1097

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TATGTATTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GGTCCCCTATGT

Flanking Amino Acid:

HNEMFIIGSYRYRLTPEGTL

Intron Amino Acid Position:

656

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

78.9

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.6

0.67

0.9

70.3

44.5

Minor 5ss

-1.7

3.8

55.2

Minor BPS

44.7

-0.3

2.1

64.15

45.3

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033587

14638056 - 14826398

188343

ENSAPLT00000011880

14638056 - 14826398

188343

ENSAPLT00000047505

14638056 - 14826313

188258