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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14767428_14770855_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14767428 - 14770855

Intron Length:

3428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTATCAGGT

5'SS Class:

weak_major

3'SS Sequence:

TTTCTACACAGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTTTTTTATTC

Flanking Amino Acid:

GTGRAQTFLDPPPIIQVPNN

Intron Amino Acid Position:

500

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.1

0.17

1.2

55.5

41.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

53.2

0.07

1.7

62.3

Minor 5ss

46.2

-0.4

3.3

68.4

42.9

Minor BPS

61.4

0.34

1.5

70.06

35.9

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040014

14734169 - 14831203

97035