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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14793185_14797354_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14793185 - 14797354

Intron Length:

4170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TAATTGTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTCTTCTAATT

Flanking Amino Acid:

QFELRELYVQGGGDCPEMSI

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

86.6

22.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

0.29

1.1

58.4

45.8

Minor 5ss

30.6

-2.2

2.6

35.8

41.1

Minor BPS

61.7

0.44

1.6

81.49

Associated Gene:

Gene:

HMCN1

Ensembl Gene ID:

ENSAPLG00000011251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033587

14638056 - 14826398

188343

ENSAPLT00000011880

14638056 - 14826398

188343

ENSAPLT00000047505

14638056 - 14826313

188258

ENSAPLT00000040014

14734169 - 14831203

97035