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Intron Name: Anas_platyrhynchos_platyrhynchos_8_14990906_14992790_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14990906 - 14992790

Intron Length:

1885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTTACAGGT

5'SS Class:

weak_major

3'SS Sequence:

TTTAGATGAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTCTCATACTT

Flanking Amino Acid:

LAVSLKTDLHKPCPLCPEEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.9

0.07

1.4

54.9

42.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

52.6

0.06

1.2

53.5

44.2

Minor 5ss

36.5

-1.5

3.4

53.4

43.7

Minor BPS

53.1

0.17

1.9

77.83

38.8

Associated Gene:

Gene:

TRMT1L

Ensembl Gene ID:

ENSAPLG00000008394

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019342

14987027 - 15008608

21582

ENSAPLT00000008739

14987198 - 15011375

24178