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Intron Name: Anas_platyrhynchos_platyrhynchos_8_15003989_15004779_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15003989 - 15004779

Intron Length:

791

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTACG

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TAGGTCTAAACT

Flanking Amino Acid:

GKTAVVLGPLWSGALFNTGF

Intron Amino Acid Position:

497

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

77.1

37.8

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

0.63

0.8

77.1

37.1

Minor 5ss

36.2

-1.6

2.6

40.8

39.1

Minor BPS

56.5

0.28

1.8

72.13

Associated Gene:

Gene:

TRMT1L

Ensembl Gene ID:

ENSAPLG00000008394

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026253

14986866 - 15007605

20740

ENSAPLT00000019342

14987027 - 15008608

21582

ENSAPLT00000008739

14987198 - 15011375

24178