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Intron Name: Anas_platyrhynchos_platyrhynchos_8_15004923_15006513_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15004923 - 15006513

Intron Length:

1591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTCCTTACG

5'SS Class:

weak_major

3'SS Sequence:

TGTATTCTAGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

GGATCTTTAATT

Flanking Amino Acid:

CTTLKNFSTHECGVYIKTPD

Intron Amino Acid Position:

727

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.8

0.07

1.4

44.6

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

63.6

0.31

1.1

65.5

40.1

Minor 5ss

30.6

-2.2

2.7

32.5

36.2

Minor BPS

0.8

1.2

78.46

37.7

Associated Gene:

Gene:

TRMT1L

Ensembl Gene ID:

ENSAPLG00000008394

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026253

14986866 - 15007605

20740