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Intron Name: Anas_platyrhynchos_platyrhynchos_8_15006571_15006983_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15006571 - 15006983

Intron Length:

413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTGGTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAA

U12 Branch Point Sequence:

TATTCAAAAATT

Flanking Amino Acid:

DTSAESCVLHGKRKNNEVVR

Intron Amino Acid Position:

580

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.2

36.5

Major BPS

0.82

0.8

83.9

25.3

Major PPT

72.8

0.51

1.1

64.8

45.7

Minor 5ss

32.2

-2

3.1

37.6

42.2

Minor BPS

48.9

2.1

75.54

40.9

Associated Gene:

Gene:

TRMT1L

Ensembl Gene ID:

ENSAPLG00000008394

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026253

14986866 - 15007605

20740

ENSAPLT00000019342

14987027 - 15008608

21582