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Intron Name: Anas_platyrhynchos_platyrhynchos_8_15006575_15006990_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15006575 - 15006990

Intron Length:

416

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTGGATCAT

5'SS Class:

major

3'SS Sequence:

GTCCAGGAAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTCAA

U12 Branch Point Sequence:

AAAAATTTCACT

Flanking Amino Acid:

TSAESCVLHGKKNNEVVRNT

Intron Amino Acid Position:

574

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.2

0.29

1.1

39.5

Major BPS

0.82

0.8

83.9

25.3

Major PPT

45.5

-0.2

1.1

37.5

37.7

Minor 5ss

30.1

-2.3

3.3

39.7

40.6

Minor BPS

46.4

-0.2

1.9

62.43

Associated Gene:

Gene:

TRMT1L

Ensembl Gene ID:

ENSAPLG00000008394

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008739

14987198 - 15011375

24178