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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1501982_1502780_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1501982 - 1502780

Intron Length:

799

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTGTACTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

CACTGTTTAACT

Flanking Amino Acid:

IMVPRPLCKETGYLLLIAVM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.8

90.9

28.7

Major BPS

79.1

0.72

69.3

38.4

Major PPT

0.52

67.5

43.1

Minor 5ss

45.3

-0.5

2.9

45.2

Minor BPS

0.39

1.8

72.26

Associated Gene:

Gene:

ABCD3

Ensembl Gene ID:

ENSAPLG00000009113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021119

1488199 - 1514667

26469

ENSAPLT00000009617

1495641 - 1515170

19530