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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1504945_1505602_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1504945 - 1505602

Intron Length:

658

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAC

U12 Branch Point Sequence:

TACCTCTTAACT

Flanking Amino Acid:

LTRYLYEEYLKAYTYYKMGN

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

77.1

0.67

77.9

32.2

Major PPT

86.5

0.82

0.9

84.6

Minor 5ss

37.8

-1.4

2.7

46.1

Minor BPS

74.7

0.85

1.2

82.35

38.7

Associated Gene:

Gene:

ABCD3

Ensembl Gene ID:

ENSAPLG00000009113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021119

1488199 - 1514667

26469

ENSAPLT00000009617

1495641 - 1515170

19530