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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1511896_1512554_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1511896 - 1512554

Intron Length:

659

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATGTTTA

5'SS Class:

major

3'SS Sequence:

CCAATACAAATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ATTTTTTTAACA

Flanking Amino Acid:

GEIINTDNLIKFDHVPLVTP

Intron Amino Acid Position:

452

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

0.9

79.5

29.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

50.3

0.01

44.5

35.4

Minor 5ss

55.6

0.19

2.3

66.5

Minor BPS

81.8

0.9

85.09

27.2

Associated Gene:

Gene:

ABCD3

Ensembl Gene ID:

ENSAPLG00000009113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021119

1488199 - 1514667

26469

ENSAPLT00000009617

1495641 - 1515170

19530