Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_15146453_15147205_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15146453 - 15147205

Intron Length:

753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

GTCTTGTGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAA

U12 Branch Point Sequence:

ACCTGTTGAACT

Flanking Amino Acid:

SVFETNIRVLGGLLGGHSVA

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

77.5

32.9

Major BPS

0.55

1.1

63.4

44.3

Major PPT

70.8

0.47

69.1

41.8

Minor 5ss

30.1

-2.3

2.6

28.4

Minor BPS

49.8

0.06

1.9

66.49

44.6

Associated Gene:

Gene:

EDEM3

Ensembl Gene ID:

ENSAPLG00000007706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047952

15139469 - 15165537

26069

ENSAPLT00000008031

15139469 - 15165537

26069