Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_15147360_15148515_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15147360 - 15148515

Intron Length:

1156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTCT

5'SS Class:

major

3'SS Sequence:

TACTTTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TAATCTCTACTT

Flanking Amino Acid:

NTTSGLPYPRVNLKFGVRHP

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

75.2

35.7

Major BPS

0.75

78.6

Major PPT

80.6

0.69

0.8

73.8

36.5

Minor 5ss

44.1

-0.6

2.8

56.3

41.9

Minor BPS

49.7

0.06

1.9

70.54

40.6

Associated Gene:

Gene:

EDEM3

Ensembl Gene ID:

ENSAPLG00000007706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047952

15139469 - 15165537

26069

ENSAPLT00000008031

15139469 - 15165537

26069