Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_15155958_15159356_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15155958 - 15159356

Intron Length:

3399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TCTTTCATTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTAATAAGT

Flanking Amino Acid:

TNQTISKKNTTTEYTELDDS

Intron Amino Acid Position:

472

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

75.5

34.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.5

0.75

0.7

82.2

28.1

Minor 5ss

38.2

-1.3

2.8

51.4

39.2

Minor BPS

52.8

0.17

2.1

81.75

39.5

Associated Gene:

Gene:

EDEM3

Ensembl Gene ID:

ENSAPLG00000007706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047952

15139469 - 15165537

26069

ENSAPLT00000008031

15139469 - 15165537

26069