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Intron Name: Anas_platyrhynchos_platyrhynchos_8_15435228_15436161_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15435228 - 15436161

Intron Length:

934

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TTAGCTTTAAAA

Flanking Amino Acid:

RRQQLLTEEESYSLSCEIEA

Intron Amino Acid Position:

638

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.8

88.6

27.1

Major BPS

73.1

0.58

79.6

29.1

Major PPT

81.9

0.72

0.8

76.3

32.3

Minor 5ss

42.7

-0.8

3.4

64.1

47.4

Minor BPS

66.3

0.51

1.5

73.34

38.4

Associated Gene:

Gene:

RGL1

Ensembl Gene ID:

ENSAPLG00000015888

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016611

15429174 - 15503718

74545