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Intron Name: Anas_platyrhynchos_platyrhynchos_8_15502450_15503250_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15502450 - 15503250

Intron Length:

801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACCGGG

5'SS Class:

major

3'SS Sequence:

CTTTTTCTGGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TCTCTCTCACTC

Flanking Amino Acid:

RMRFLWRAKMSSIQDWGEEV

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.2

50.7

46.2

Major BPS

72.7

0.56

30.1

Major PPT

82.8

0.74

0.9

80.6

31.4

Minor 5ss

41.4

-1

3.3

52.7

46.4

Minor BPS

47.9

-0.1

1.8

59.18

40.5

Associated Gene:

Gene:

RGL1

Ensembl Gene ID:

ENSAPLG00000015888

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016611

15429174 - 15503718

74545