Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_15742460_15742944_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15742460 - 15742944

Intron Length:

485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTTAGTAAA

5'SS Class:

major

3'SS Sequence:

TATTTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTGTTTTAAACT

Flanking Amino Acid:

YFMIADVSTLNVDLSDEDGN

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

78.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

89.4

0.89

0.7

89.2

27.3

Minor 5ss

33.1

-1.9

2.5

35.6

34.1

Minor BPS

59.9

0.39

1.7

74.34

43.4

Associated Gene:

Gene:

KYAT3

Ensembl Gene ID:

ENSAPLG00000015343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016017

15726987 - 15744510

17524

ENSAPLT00000044692

15729926 - 15744510

14585