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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1598372_1598513_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1598372 - 1598513

Intron Length:

142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTTTCTTTCATT

Flanking Amino Acid:

SMARPVGRRQDSGECVAELR

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

59.7

46.7

Major BPS

87.6

0.93

0.9

89.3

Major PPT

83.5

0.75

0.7

82.2

28.1

Minor 5ss

31.8

-2.1

38.6

46.5

Minor BPS

67.1

0.62

1.7

82.98

39.3

Associated Gene:

Gene:

SLC44A3

Ensembl Gene ID:

ENSAPLG00000010624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039721

1597779 - 1638755

40977

ENSAPLT00000011104

1598021 - 1637423

39403