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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1598622_1601030_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1598622 - 1601030

Intron Length:

2409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGCGTG

5'SS Class:

major

3'SS Sequence:

AATGTTTTAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

AATGTTTTAATA

Flanking Amino Acid:

LLFFLFWAGSMFITGYAVMA

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

67.4

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

67.6

0.4

42.2

Minor 5ss

40.4

-1.1

3.4

56.3

47.9

Minor BPS

62.1

0.38

1.3

65.87

34.9

Associated Gene:

Gene:

SLC44A3

Ensembl Gene ID:

ENSAPLG00000010624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011104

1598021 - 1637423

39403

ENSAPLT00000046210

1563697 - 1638489

74793

ENSAPLT00000039721

1597779 - 1638755

40977