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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1601174_1601772_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1601174 - 1601772

Intron Length:

599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTACG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GTTTTTTGAAAT

Flanking Amino Acid:

PLSGQDMTNKKYVFFLNSCS

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

78.2

36.3

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

84.7

0.78

0.8

77.7

36.7

Minor 5ss

37.8

-1.4

2.7

44.3

36.8

Minor BPS

61.9

0.45

1.5

78.61

37.2

Associated Gene:

Gene:

SLC44A3

Ensembl Gene ID:

ENSAPLG00000010624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046210

1563697 - 1638489

74793

ENSAPLT00000039721

1597779 - 1638755

40977

ENSAPLT00000011104

1598021 - 1637423

39403