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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1603377_1604842_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1603377 - 1604842

Intron Length:

1466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTAACCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTTTTAACC

Flanking Amino Acid:

ELCPTLPVPPSKSFPLFNRC

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

100

1.24

0.5

100

Major PPT

80.1

0.68

0.9

70.4

40.8

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

85.8

1.1

0.9

89.58

24.4

Associated Gene:

Gene:

SLC44A3

Ensembl Gene ID:

ENSAPLG00000010624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046210

1563697 - 1638489

74793

ENSAPLT00000039721

1597779 - 1638755

40977

ENSAPLT00000011104

1598021 - 1637423

39403