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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1605675_1606313_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1605675 - 1606313

Intron Length:

639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTGCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCACAC

U12 Branch Point Sequence:

CCCACCTTCACA

Flanking Amino Acid:

LIALVVFGLLFVSGVLWWLY

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

89.1

24.1

Major BPS

67.8

0.44

30.1

Major PPT

82.1

0.72

0.9

77.3

Minor 5ss

41.7

-0.9

2.8

41.5

Minor BPS

52.8

0.08

1.9

59.26

46.6

Associated Gene:

Gene:

SLC44A3

Ensembl Gene ID:

ENSAPLG00000010624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011104

1598021 - 1637423

39403

ENSAPLT00000046210

1563697 - 1638489

74793

ENSAPLT00000039721

1597779 - 1638755

40977