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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1606439_1607955_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1606439 - 1607955

Intron Length:

1517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

TTTTTTGTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAG

U12 Branch Point Sequence:

TTTTTTGTAACA

Flanking Amino Acid:

GYAIFSTIITIVLLSLILVL

Intron Amino Acid Position:

407

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

75.9

39.9

Major BPS

0.32

1.6

71.9

Major PPT

83.9

0.76

0.9

35.4

Minor 5ss

39.6

-1.2

2.9

57.1

41.1

Minor BPS

66.5

0.51

82.25

33.1

Associated Gene:

Gene:

SLC44A3

Ensembl Gene ID:

ENSAPLG00000010624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046210

1563697 - 1638489

74793

ENSAPLT00000039721

1597779 - 1638755

40977

ENSAPLT00000011104

1598021 - 1637423

39403