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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1608143_1616452_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1608143 - 1616452

Intron Length:

8310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

ATCCCAATCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

ATTGTATTAATA

Flanking Amino Acid:

VAVLLSLGTAGTAQTTSEGQ

Intron Amino Acid Position:

469

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.15

0.6

96.2

11.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

65.5

0.35

0.9

55.4

38.5

Minor 5ss

39.3

-1.2

2.8

50.9

45.5

Minor BPS

59.2

0.29

1.7

70.26

36.2

Associated Gene:

Gene:

SLC44A3

Ensembl Gene ID:

ENSAPLG00000010624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046210

1563697 - 1638489

74793

ENSAPLT00000039721

1597779 - 1638755

40977

ENSAPLT00000011104

1598021 - 1637423

39403