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Intron Name: Anas_platyrhynchos_platyrhynchos_8_16104503_16105614_F

Intron Information:

Intron Rank:

134832

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16104503 - 16105614

Intron Length:

1112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

ATCATACAATCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

ATTCTAGTAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

59.8

0.22

1.1

57.2

Minor 5ss

31.6

-2.1

3.3

41.1

45.4

Minor BPS

44.1

-0.3

2.4

68.48

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024276

16104418 - 16105857

1440