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Intron Name: Anas_platyrhynchos_platyrhynchos_8_16260009_16300129_F

Intron Information:

Intron Rank:

135763

Intron Class:

major

Intron Phase:

Intron Coordinates:

16260009 - 16300129

Intron Length:

40121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

GCTTTCCATCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTTTATTCATGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.2

75.8

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

71.1

0.48

0.9

63.1

38.7

Minor 5ss

36.9

-1.5

2.7

45.6

42.5

Minor BPS

46.5

-0.1

2.2

72.9

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042846

16107820 - 16300270

192451