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Intron Name: Anas_platyrhynchos_platyrhynchos_8_16300705_16301416_F

Intron Information:

Intron Rank:

128232

Intron Class:

major

Intron Phase:

Intron Coordinates:

16300705 - 16301416

Intron Length:

712

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTATGAATGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTTCTTTATGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

74.9

35.3

Major BPS

83.9

0.84

73.9

41.3

Major PPT

61.8

0.27

1.2

61.9

42.6

Minor 5ss

29.4

-2.4

3.1

33.3

41.7

Minor BPS

64.4

0.45

1.9

78.76

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033517

16300291 - 16304391

4101