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Intron Name: Anas_platyrhynchos_platyrhynchos_8_16328554_16342936_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16328554 - 16342936

Intron Length:

14383

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAATACT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAG

U12 Branch Point Sequence:

TCTTCCTTCCTC

Flanking Amino Acid:

QSNPLLPDQKPGLAHVPACS

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

82.9

28.7

Major BPS

52.1

0.05

1.6

63.1

44.4

Major PPT

76.5

0.6

0.7

68.6

31.8

Minor 5ss

32.3

-2

2.8

43.2

43.8

Minor BPS

44.4

-0.4

3.6

69.44

42.9

Associated Gene:

Gene:

LMO4

Ensembl Gene ID:

ENSAPLG00000030327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034239

16328452 - 16353035

24584