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Intron Name: Anas_platyrhynchos_platyrhynchos_8_16338792_16342936_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16338792 - 16342936

Intron Length:

4145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAATACT

5'SS Class:

strong_major

3'SS Sequence:

TTATTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CCATTTTTATTT

Flanking Amino Acid:

QSNPLLPDQKVC*

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

82.9

28.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.5

0.89

0.7

85.1

29.3

Minor 5ss

32.3

-2

2.8

43.2

43.8

Minor BPS

51.4

0.12

1.6

63.14

42.4

Associated Gene:

Gene:

LMO4

Ensembl Gene ID:

ENSAPLG00000030327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035472

16338031 - 16353035

15005