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Intron Name: Anas_platyrhynchos_platyrhynchos_8_16343544_16350125_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16343544 - 16350125

Intron Length:

6582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCAGG

5'SS Class:

major

3'SS Sequence:

ACCTCTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTAAATAATT

Flanking Amino Acid:

GMILCRNDYIRLFGNSGACS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

59.7

46.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.58

0.9

72.6

Minor 5ss

31.9

-2.1

3.1

39.2

46.3

Minor BPS

0.27

83.6

36.7

Associated Gene:

Gene:

LMO4

Ensembl Gene ID:

ENSAPLG00000030327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035472

16338031 - 16353035

15005

ENSAPLT00000034239

16328452 - 16353035

24584