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Intron Name: Anas_platyrhynchos_platyrhynchos_8_16350365_16352322_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

16350365 - 16352322

Intron Length:

1958

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

CCCTGTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CGGCCCTGACCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

70.9

0.47

0.8

64.6

30.9

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

47.1

-0.2

1.8

53.46

43.8

Associated Gene:

Gene:

LMO4

Ensembl Gene ID:

ENSAPLG00000030327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035472

16338031 - 16353035

15005

ENSAPLT00000034239

16328452 - 16353035

24584