Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_1635497_1635611_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1635497 - 1635611

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCCCC

5'SS Class:

major

3'SS Sequence:

TTTCTTTTCCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTAATCTGAACT

Flanking Amino Acid:

KPYFVDQELLPLEQNGLRDA

Intron Amino Acid Position:

730

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

62.4

42.4

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

78.6

0.64

78.8

33.5

Minor 5ss

39.3

-1.2

49.3

40.9

Minor BPS

67.9

0.64

1.4

82.64

37.9

Associated Gene:

Gene:

SLC44A3

Ensembl Gene ID:

ENSAPLG00000010624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011104

1598021 - 1637423

39403