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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1643642_1644129_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1643642 - 1644129

Intron Length:

488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CCTGTTTCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TCTTATTGAACC

Flanking Amino Acid:

QMGTNKGASQAGMLAPGTRR

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

68.8

0.42

0.9

62.7

38.5

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

61.6

0.34

1.6

72.11

38.9

Associated Gene:

Gene:

CNN3

Ensembl Gene ID:

ENSAPLG00000011050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042866

1643294 - 1664027

20734

ENSAPLT00000018310

1643294 - 1698884

55591

ENSAPLT00000011508

1642536 - 1664935

22400