Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_1644277_1645044_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1644277 - 1645044

Intron Length:

768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCCATAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAGAT

U12 Branch Point Sequence:

GATCTCTTACTC

Flanking Amino Acid:

KAGQSVIGLQMGTNKCASQA

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.4

1.09

0.7

Major BPS

62.6

0.31

58.7

38.1

Major PPT

64.1

0.32

63.9

30.6

Minor 5ss

35.1

-1.7

2.7

41.5

45.1

Minor BPS

53.8

0.1

1.6

61.36

37.9

Associated Gene:

Gene:

CNN3

Ensembl Gene ID:

ENSAPLG00000011050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018310

1643294 - 1698884

55591

ENSAPLT00000011508

1642536 - 1664935

22400

ENSAPLT00000042866

1643294 - 1664027

20734